Public Member Functions | |
| ContiguousFragmentLoader (GridLoader &theGridLoader, const RefPtr< Skeleton > &theContainingSkeleton, const RefPtr< Representation > &theRepresentation, const RefPtr< Field > &CurrentField, const string &FieldNameInFile, const RefPtr< H5Group > &theFieldGroup, const RefPtr< LoaderProgress > &lp, const WeakPtr< StorageTransformations::IOPerformance > &LoadPerformance, const RefPtr< FiberTypeBase > &TheFiberType, const string &the_path_info, const WeakPtr< Fiber::Skeleton > &theRepresentationTarget, F5Path *field, int NumberOfFields, int CurrentFieldNumber) | |
| bool | loadAllFragments (F5Path *field) |
| herr_t | apply (F5Path *field, const char *fragmentname) override |
| Public Member Functions inherited from Fiber::FiberIO::HDF5::FragmentLoader | |
| FragmentLoader (GridLoader &theGridLoader, const RefPtr< Skeleton > &theContainingSkeleton, const RefPtr< Representation > &theRepresentation, const RefPtr< Field > &CurrentField, const string &FieldNameInFile, const RefPtr< H5Group > &theFieldGroup, const RefPtr< LoaderProgress > &lp, const WeakPtr< StorageTransformations::IOPerformance > &LoadPerformance, const RefPtr< FiberTypeBase > &TheFiberType, const string &the_path_info) | |
| bool | getFragmentNames (FragmentNames_t &, F5Path *field) |
| herr_t | iterate (F5Path *field) |
| herr_t | loadContiguousFragment (F5Path *field, const char *fragmentname, const WeakPtr< Fiber::Skeleton > &theRepresentationTarget) |
| herr_t | loadUniformFragment (F5Path *field, const char *fragmentname) |
| bool | loadViaFragmentCache (const RefPtr< H5Group > &) |
| Public Member Functions inherited from Fiber::FiberIO::HDF5::PrecisionTransformation | |
| void | setFragmentFiberType (const RefPtr< FiberTypeBase > &TheFiberType) |
| bool | doTransformPrecision () const |
| PrecisionTransformation (const RefPtr< FiberTypeBase > &) | |
| RefPtr< CreativeArrayBase > | newCreator (const RefPtr< LoaderProgress > &TheLoaderProgressor, const F5Fragment &theFragment, const DynamicSize &SI, const RefPtr< FiberIO::HDF5::FileNameInterface > &FragmentFileInfo, const WeakPtr< StorageTransformations::IOPerformance > &theLoadPerformance, const string &fragmentname, const string &FieldSource) const |
| void | shiftAttributes (Attributes &A) |
| Modify attributes such as the range if the precision is changed during I/O. | |
Public Attributes | |
| MemCore::WeakPtr< Fiber::Skeleton > | myRepresentationTarget |
| int | NumberOfFields = 0 |
| int | CurrentFieldNumber = 0 |
| Public Attributes inherited from Fiber::FiberIO::HDF5::FragmentLoader | |
| GridLoader & | myGridLoader |
| RefPtr< Skeleton > | mySkeleton |
| RefPtr< Field > | MyField |
| RefPtr< H5Group > | myFieldGroup |
| RefPtr< LoaderProgress > | LP |
| WeakPtr< StorageTransformations::IOPerformance > | LoadPerformance |
| string | path_info |
| int | GroupEntries = 0 |
| hid_t | type_class_id = -1 |
| RefPtr< H5GroupAccess > | GroupAccess |
| RefPtr< H5DatasetAccess > | DatasetAccess |
| RefPtr< H5FileAccess > | myVFD |
| std::unordered_set< std::string > | IgnoreAttributesOnLoad |
| Public Attributes inherited from Fiber::FiberIO::HDF5::PrecisionTransformation | |
| RefPtr< FiberTypeBase > | FieldFiberType |
| The type how it shall appear in the fiber bundle field. | |
| RefPtr< FiberTypeBase > | FragmentFiberType |
| RefPtr< FiberTypeBase > | NativeFiberType |
| The type how it is in the file, if its different. | |
Additional Inherited Members | |
| Public Types inherited from Fiber::FiberIO::HDF5::FragmentLoader | |
| using | FragmentNames_t = std::vector<string> |
| Static Public Member Functions inherited from Fiber::FiberIO::HDF5::PrecisionTransformation | |
| static bool | readPossiblyConvertedData (RefPtr< MemBase > &NewData, CreativeArrayBase &theCreator) |
| Function is similar to CreativeArrayBase::create() but more efficient than raw HDF5 in case data need to be converted from float to double precision upon reading. | |
| static bool | possiblyShiftData (RefPtr< MemBase > &NewData, CreativeArrayBase &theCreator) |
| static std::pair< bool, hid_t > | getFileType (const StorageTransformations::FilterSettings &FS, hid_t Mem_type_hid, const Fiber::Field &theField, F5Path *myPath) |
| Determine whether that specific field thing shall be written in single precision. | |
| static void | adjustFileWriteInformation (const StorageTransformations::FilterSettings &FS, CreativeArrayBase &FieldFragmentAttributes, Attributes &OverrideStorageAttributes, AttributeSet_t &DontSaveAttributeSet, RefPtr< ChunkBase > &Mb, bool WriteDoubleTypeInSinglePrecision, bool Write_Shifted_Single_Precision_Range) |
| Modify the information that will be written to the file. | |
| static void | adjustAttributeWriteInformation (const CreativeArrayBase &FragmentAttributes, Attributes &OverrideStorageAttributes, bool Write_Shifted_Single_Precision_Range) |
| static RefPtr< Chunk< Eagle::point3f > > | reduce_to_single_precision (const FixedArray< double, 3 > &Shift, const Chunk< Eagle::point3 > &Input) |
| static RefPtr< Chunk< Eagle::point3 > > | expand_to_double_precision (const FixedArray< double, 3 > &Shift, const Chunk< Eagle::point3f > &Input) |
| Static Public Attributes inherited from Fiber::FiberIO::HDF5::PrecisionTransformation | |
| static constexpr const char | NumericalShiftAttributeName [] = FIBER_FRAGMENT_NUMERICALSHIFT_ATTRIBUTE |
Member Function Documentation
◆ apply()
|
overridevirtual |
Implements Fiber::FiberIO::HDF5::FragmentLoader.
◆ loadAllFragments()
| bool Fiber::FiberIO::HDF5::ContiguousFragmentLoader::loadAllFragments | ( | F5Path * | field | ) |
Indicate that the data managed here are already saved, and their "last saved" time is identical to the construction time of this Creator.
Create a self-representation just to store the fragment ID collection in the Skeleton. The field is empty and has no data, so nothing to save here. This is a workaround that should not be required unless new fields are created without having data loaded, which otherwise goes via the GridLoader's SkeletonFragmentIDCollections registry. Thus, this could should not be needed and the version below should do.
Indicate that the data managed here are already saved, and their "last saved" time is identical to the construction time of this Creator.
Indicate that the data managed here are already saved, and their "last saved" time is identical to the construction time of this Creator.
Indicate that the data managed here are already saved, and their "last saved" time is identical to the construction time of this Creator.
References Fiber::FiberIO::HDF5::PrecisionTransformation::FieldFiberType, H5DataType::is_committed(), Fiber::FiberIO::HDF5::FragmentLoader::loadViaFragmentCache(), Fiber::FiberIO::HDF5::PrecisionTransformation::NativeFiberType, Fiber::H5ID::retrieve(), MemCore::Timer::secs(), Fiber::FiberIO::HDF5::PrecisionTransformation::setFragmentFiberType(), Fiber::FiberIO::HDF5::PrecisionTransformation::shiftAttributes(), std::vector< typename _Tp, typename _Alloc >::size(), and MemCore::to_string().
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